Private: Bioinformatics Answers › Category: Questions › Convert fastq to fasta 0 Vote Up Vote Down Sej Modha asked 8 years ago How can I convert a fastq file to a fasta file? 2 Answers 2 Vote Up Vote Down Best Answer Richard Orton Staff answered 8 years ago You could try the mighty ortools: java -jar ~orto01r/dist/ortools.jar -a InputFile.fastq Will create: InputFile.fasta 0 Vote Up Vote Down Richard Orton Staff answered 8 years ago test