BingleSeq is an R-package that enables the user-friendly analysis of count tables obtained by both Bulk RNA-Seq and single-cell RNA-Seq protocols. The development of BingleSeq focused on providing a flexible and intuitive user experience. As such BingleSeq implements three state-of-the-art package options for each analysis while it also enables users to tailor key analysis parameters according to their experiment.
Dimitrov, D. and Gu, Q. (2020) BingleSeq: A user-friendly R package for bulk and single-cell RNA-Seq data analysis. PeerJ, 8, e10469.